Instructions:

The Epigenomic Correlation module provides details into the correlation analysis of epigenetic modification signals between two synteny-conserved lncRNAs in specific samples. Before using this module, you can retrieve synteny-conserved lncRNA pairs in the " Synteny-Conserved LncRNA Prediction".

Regions of synteny-conserved lncRNAs were divided into upstream 2 kb, gene body, and downstream 2 kb regions, with each part further divided into 20 subregions. The modification level for each subregion was calculated using CGmaptools or deepTools. Finally, the correlation of epigenetic modification levels between two specified samples was computed using a Python script with the Spearman method.

Help Note:

1. Choose the Epigenomic Type; 2. Select the interested Sample1 and Sample2; 3. Enter the synteny-conseved lncRNA ID; 4. Click "Submit" buttom and show results. Furthermore, clicking on "Example" buttom will display default information.